Dear Jan,
When importing the JSON-LD file, you’ll be prompted to choose how to handle existing datasets in your database. If you already have a previous version of the method pack imported and want to upgrade it, it’s recommended to select the "Overwrite everything" option. After the process is complete, the folder from the older pack will remain but will be empty and can be safely deleted. Could this be the reason your students are experiencing issues when importing the method pack?
Best,
Sarah