Hi Ankit,
I think that the tutorial covers automatically linking processes to create the product system and manually linking to do it. A common thing with our students (and when I did it) is that their manual linking might be to very slightly different processes or something like that. For ELCD this can cause big differences as not all flows have appropriate providing processes.
I suggest maybe look at whether the differences are due to a couple of particular processes.
Hope that helps, Sam